1.         Chao Chai, Zhiming Yu, Zhiliang Shen, Xiuxian Song, Xihua Cao, Yun Yao. Nutrient characteristics in the Yangtze River Estuary and the adjacent East China Sea before and after impoundment of the Three Gorges Dam, Science of the Total Environment, 2009. 407:4687-4695.

2.         LIU Xiu-Juan, YU Zhi-Ming, SONG Xiu-Xian, CAO Xi-Hua. Pretreatment Method for Nitrogen Isotopic Analysis of Nitrate in Seawater，CHINESE JOURNAL OF ANALYTICAL CHEMISTRY, 2009. 37（5）：643-647.

3.         Yanfang Zhao, Zhiming Yu, Xiuxian Song and Xihua Cao. Biochemical compositions of two dominant bloom- forming species isolated from the Yangtze River Estuary in response to different nutrient conditions, Journal of Experimental Marine Biology and Ecology, 2009. 368:30-36.

4.         Xiujuan Liu, Zhiming Yu, Xiuxian Song, Xihua Cao. The Nitrogen Isotopic Composition of Dissolved Nitrate in the Yangtze River (Changjiang) Estuary, China, Estuarine, Coastal and Shelf Science. 2009.

5.         JIANG Tao, YU Zhiming, SONG Xiuxian, CAO Xihua. Long-term ecological interaction between nutrients and phytoplankton community in the Changjiang Estuary，Chinese Journal of Oceanology and Limnology. 2009.

6.         YAN Tian，WANG Yunfeng，WANG Liping，CHEN Yang，HAN Gang，ZHOU Mingjiang. Application of rotifer Brachionus plicatilis in detecting the toxicity of harmful alga. Chinese Journal of Oceanology and Limnology, 2009. 27(2): 376-382.

7.         ZHAO Weihong, Wang Jiangtao, Chen Meimei. Three-dimensional fluorescence characteristics of dissolved organc matter produced by Prorocentrum donghaiense Lu., Chin. J. Ocenol. Limnol, 2009. 27(3): 564-569.

8.         Chen B Z, Liu H B, Landry M R, Chen M R, Sun J, Shek L L, Harrisona P J. Estuarine nutrient loading affects phytoplankton growth and microzooplankton grazing at two contrasting sites in Hong Kong coastal waters. Marine Ecology Progress Series, 2009. 379:77-90.

9.         Chen B Z, Liu H B, Landry M R, Dai M H, Huang B Q, Sun J. Close coupling between phytoplankton growth and microzooplankton grazing in the western South China Sea. Limnology and Oceanography, 2009. 54(4): 1084-1097.

10.     Feng Y Y, Hare C E, Leblance K, Rose J M, Zhang Y H, DiTullio G R, Lee P A, Wilhelm S W, Rowe J M, Sun J, Nemcek N, Guenguen C, Passow U, Benner I, Hutchins D A. Effects of Increased pCO₂ and Temperature on the North Atlantic Spring Bloom: I. The Phytoplankton Community and Biogeochemical Response. Marine Ecology Progress Series, 2009. 388:13-25.

11.     Zhang W C, Tang D L, Yang B, Gao S W, Sun J, Tao Z C, Sun S. Onshore-offshore variations of copepod community in northern South China Sea. Hydrobiologia, 636(1):257-269.

12.     Ning X, Peng X, Le F, Hao Q, Sun J, Liu C, Cai Y. Nutrient limitation of phytoplankton in anticyclonic eddies of the northern South China Sea. Biogeosciences Discuss., 5, 4591-4619, 2008. SRef-ID: 1810- 6285/bgd/2008-5- 4591.

13.     Rajkumar M, Kumaraguru Vasagam K P, Li X Z, Sun J. First record of marine crab, `Eucrate alcocki Serène, in Serène and Lohavanijaya, 1973 (Crustacea, Decapoda, Brachyura, Euryplacidae) from India. Chinese Journal of Limnology and Oceanography. 27(4): 832-834.

14.     Ayyappan Saravanakumar, Mayalagu Rajkumar, Jun Sun, Jebaraj SeshSerebiah, Gobi Alagiri Thivakaran. Forest structure of arid zone mangroves in relation to their physical and chemical environment in the western Gulf of Kachchh, Gujarat, Northwest coast of India. J Coast Conserv, 2009. 13: 217–234.

15.     Zhipeng He, Jinming Song, Naixing Zhang, Peng Zhang, Yayan Xu. Variation characteristics and ecological risk of heavy metals in the south Yellow Sea surface sediments. Environmental Monitoring and Assessment, 2009. 157: 515– 528.

16.     Zhang Peng, Song Jinming, FangJie, Liu Zhigang, Li Xuegang and Yuan Huamao. One century record of contamination by polycyclic aromatic hydrocarbons and polychlorinated biphenyls in the core sediment of the southern Yellow Sea. Journal of Environmental Sciences. 2009. 21(8):1080-1088.

17.     Yuan Huamao, Song Jinming, Li Ning, Li Xuegang, Zhang Ying. Spatial distributions and seasonal variations of particulate phosphorus in the Jiaozhou Bay in North China. Acta Oceanologica Sinica, 2009. 28 (1) :99-108.

18.     Peng Zhang, Jinming Song, Huamao Yuan. Persistent organic pollutants residue in sediments and mollusks from the Bohai Sea coastal area, North China: An Overview. Environmental International, 2009. 35:632-646.

19.     Ying Zhang, Jinming Song, Zhipeng He, Huamao Yuan, Yayan Xu. Toxic Octabromodiphenyl Ether Is Being Transported From Rich to Poor Via Electronic Waste. AMBIO, 2009. 38(2):115-117.

20.     Zhang C, Zhang W, Xiao T, Lu R, Sun S, Song W. Wintertime meso-scale horizontal distribution of large tintinnids in southern Yellow Sea. Chinese Journal of Oceanology and Limnology. 2009 27(1):31-37.

21.     WANG Zifeng, XIAO Tian, PANG Shaojun, LIU Min, YUE Haidong. Isolation and identification of bacteria associated with the surfaces of several algal species Chinese Journal of Oceanology and Limnology. 2009 27(3):487-492.

22.     禚鹏基，赵卫红. 东海硅藻赤潮后海水溶解有机物的荧光特征. 光谱学与光谱分析，2009，29(5)：1349-1353.

23.     王江涛，关哈斯高娃，赵卫红，王修林. 东海海水中荧光溶解有机物质的三维荧光光谱特征. 光谱学与光谱分析，2009. 29(5)：1345-1348.

24.     Wang Shiwei, Li Chaolun, Sun Song. Spring and autumn reproduction of Calanus sinicus in the Yellow Sea. Marine Ecological Progress Series 2009 379:123-133.

25.     Zhang F., Li C. L., Sun S., Wu Y. L., Ren J. P. Distribution patterns of chlorophyll a in spring and autumn in association with hydrological features in the southern Yellow sea and northern East China Sea. Chinese Journal of Oceanology and Limnology, 2009. 27 (4): 784-792.

26.     Tao Zhang, Qing Wang, Hongsheng Yang. Involvement of Ca²⁺ Signaling Pathway During Oocyte Maturation of the Northern Quahog Mercenaria mercenaria. J. Shellfish. Res. , 2009. 28(3):527-532.

27.     Yuan Xiutang, Yang Hongsheng, Wang Lili, Zhou Yi, Gabr HR. Bioenergetic responses of sub-adult sea cucumber Apostichopus japonicus (Selenka) (Echinodermata: Holothuroidea) to temperature with special discussion regarding its southernmost distribution limit in China. Journal of Thermal Biology, 2009, 34( 6): 315-319.

28.     Wang Qing,Liu Baozhong, Yang Hongsheng, Wang Xiaoyu, Lin Zhihua.  Toxicity of lead, cadmium and mercury on embryogenesis, survival, growth and metamorphosis of Meretrix meretrix larvae. Ecotoxicology, 2009, 18:829–837.

29.     Mao Yuze, Yang Hongsheng, Zhou Yi, Ye Naihao, Fang Jianguang. Potential of the seaweed Gracilaria lemaneiformis for integrated multi-trophic aquaculture with scallop Chlamys farreri in North China. Journal of Applied Phycology, 2009. 21: 649-65.

30.     GAO Fei, YANG Hongsheng , XU Qiang, WANG Fangyu, LIU Guangbin. Effect of water temperature on digestive enzyme activity and gut mass in sea cucumber Apostichopus japonicus (Selenka), with special reference to aestivation. Chinese Journal of Oceanology and Limnology, 2009, 27(4), 714-722.

31.     Song-Zhe Fu, Hong-Xia Fan, Shuang-Jiang Liu, Ying Liu and Zhi-Pei Liu. A bioaugmentation failure caused by phage infection and weak biofilm formation ability. Journal of Environmental Sciences, 2009, 21: 1151-1161.

32.     YU Haicheng (于海成), XIAN Weiwei (线薇微). The environment effect on fish assemblage structure in waters adjacent to the Changjiang (Yangtze) River estuary (1998–2001). Chinese Journal of Oceanology and Limnology, 2009. 27(3): 443-456.

33.     Liu Yong, Xian Weiwei, Sun Shichun. Metabolism of polychaete, Neanthes japonica Izuka：relations to temperature, salinity and body weight. Chinese Journal of Ocenology and Limnology, 2009, 27(2): 356-364.

34.     Cao, L., Huang, W., Shan, X.J., Xiao, Z.Z., Wang, Q.Y., Dou, S.Z. Cadmium toxicity to embryonic-larval development and survival in red sea bream Pagrus major. Ecotoxicology and Environmental Safety. Online in press. doi: 10.1016/ j.ecoenv. 2009.06.002.

35.     Shan, X.J., Cao, L., Huang W., Dou S.Z. Feeding, morphological changes and allometric growth during starvation in miiuy croaker larvae. Environmental Biology of Fishes. Online in press. 2009. doi:10.1007/s10641-008- 9412-0.

36.     Shan, X.J., Huang W., Cao, L., Xiao, Z.Z., Dou S.Z. 2009. Ontogenetic development of digestive enzymes and effect of starvation in miiuy croaker Miichthys miiuy larvae. Fish Physiology and Biochemistry 35, 385-398. doi: 10.1007/s10695-008-9263-9.

37.     孙松, 蒲新明, 张永山. 南大洋普里兹湾的铁加富实验：对铁假说的检验. 中国科学 D辑：地球科学, 2009. 39(2):  212-221.

38.     唐祥海, 于仁成, 张清春, 王云峰, 颜天, 周名江. 应用单细胞rDNA序列测定方法鉴定不同生活史阶段的亚历山大藻. 高技术通讯, 2009. 19(12): 1310-1315.

39.     傅松哲，宋奔奔，刘鹰，刘志培. 弧菌拮抗菌的筛选及其对凡纳摈对虾的抑菌防病作用.中国环境科学. 2009, 29(8): 867-872.